Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899174.1_cds_XP_016449140.1_43725
CDS Infomation

[gene=LOC107774175] [db_xref=GeneID:107774175] [protein=metal tolerance protein 2 isoform X2] [protein_id=XP_016449140.1] [location=join(33652..34011,34673..34742,35294..35391,35474..35628,36369..36484,39612..39651,40497..40581,41093..41155,41294..41399,41839..41981,42296..42387,42491..42644)] [gbkey=CDS]
Sequence

ATGGTAGCTAGATTGATTTCAAGCAATCTAAATCGAATACGAAAAACGTATATATCATCA
ACTATTAGATACAACAACAATTTCACTCCTCTATATCTATCTCCCAATTTCCAATTCGAT
AATGATGATTCAGCTACAAGTATGGGGAGTCGCAGCTTTATGCTTCAGAAAAGATGGCAT
ACGGGACATTCACATTCACATCATGACCATGACGACCTCCGCTCCGGTAAAAACGGCGAG
AGGATTTTCCGGCTTGGCCTCGCTGCTGATATTGGCCTCGCCGCCAGTAAAGCTTTCACA
GGTTATATATGTGGTAGCACCGCCATTATCGCTGATGCCGCCCATTCTATCTCCGATGTG
GTTCTGAGTGGAGTGGCATTGCTGTCGTTTAAAGCTGCAAGGGTTCCCAAGGACAAAGAA
CATCCTTATGGACATGGTAAATTTGAGACTCTTGGAGCTCTTGGAATTTCTGGTGTACTA
TTGGCTACTGCTGGAGGTATTGGATGGCATGCTTTAGATGTTTTGCTGGGATTATGGTCT
ACAGCGCCCGAAGTTGTTAACCAGTCATTGAGTCATCTGGACGTGCATGAGCAACATCAT
AGTGGACATCACCATGGAATAGATATGGATCACCCTATTCTTGCTTTGAATGTGACTATA
CTCTCTATAGCTGTTAAAGAAGGATTATACTGGATGACAAAGAGAGCGGGGGATAAGATT
GGCAGTGGACTGATGAAAGCCAATGCTTGGCATCATCGTGCTGATGCAGTATCCTCCGTC
GTTGCTCTCATAGGAGTTGGCATGATCATGAAAGCTGGACTTGAAACCGGATATCAGAGT
GTCTTGGAATTGGTTGATGCTGCTATTCCTTCACATACCCTGAAGCCTTTCAAGCGCATG
ATTCTACAAGTTGATGGAGTTAAGGGATGCAGTCACCTGAGGGGAAGGAGGGCTGGTTCA
TATCTCTATCTTGATGTTATTGTTGAGGTTGACCCCTTTTCTAGTGTGAGTGCCGCACAT
GAAATCGGGGAAAACGTCCGCCGTGAAATCCAGCAGTTACATCCCGAAATTGCCGAAGTC
TTCGTACACATAGAGCCATCCACTATACACATTCCACCAACTGTTGTGTTTCAGCAGAGG
GCTAACACAATGGGTGCCCCCCAAGACCATTCTTCAATGGAGCTCGCAGACATTGAAAAT
AAAGTTTACAACATTTTATCTACAAACTATTCTCAGAAGATGATAATTGAGCGTGTAAAT
CCACATCTGTTGCAAGGACAGATTTTACTTCAAGTTGAAGTTTCTATGCCTCCTGATCTC
TTGATTAGGGATGCGGAAAAAGTTGCAGAAGAAGCAGAGAAATTAATCATAGAGGCAGCA
CCAGATATTGTTCATGTGTGCATTCAGCTACGCCTAGGGCAACCTATGCCAGAGCCTTAC
AAGGAATGGGTGGACAGTAGAAGTGAGAGGAAAGATAACTGA

Peptide Sequence

PEP ID

XP_016449140.1
PEP Infomation

PREDICTED: metal tolerance protein 2 isoform X2 [Nicotiana tabacum]
Sequence

MVARLISSNLNRIRKTYISSTIRYNNNFTPLYLSPNFQFDNDDSATSMGSRSFMLQKRWH
TGHSHSHHDHDDLRSGKNGERIFRLGLAADIGLAASKAFTGYICGSTAIIADAAHSISDV
VLSGVALLSFKAARVPKDKEHPYGHGKFETLGALGISGVLLATAGGIGWHALDVLLGLWS
TAPEVVNQSLSHLDVHEQHHSGHHHGIDMDHPILALNVTILSIAVKEGLYWMTKRAGDKI
GSGLMKANAWHHRADAVSSVVALIGVGMIMKAGLETGYQSVLELVDAAIPSHTLKPFKRM
ILQVDGVKGCSHLRGRRAGSYLYLDVIVEVDPFSSVSAAHEIGENVRREIQQLHPEIAEV
FVHIEPSTIHIPPTVVFQQRANTMGAPQDHSSMELADIENKVYNILSTNYSQKMIIERVN
PHLLQGQILLQVEVSMPPDLLIRDAEKVAEEAEKLIIEAAPDIVHVCIQLRLGQPMPEPY
KEWVDSRSERKDN

Transcript Sequence

Gene sequence data has not been registered.